Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRAMD1AQ96CP6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.3■□□□□ 0.36
GRAMD1AQ96CP6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRAMD1AQ96CP6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GRAMD1AQ96CP6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.3■□□□□ 0.36
GRAMD1AQ96CP6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRAMD1AQ96CP6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 KRT8P47-201ENST00000604727 1398 ntBASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 SLC25A1P3-201ENST00000395415 828 ntBASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 AC125634.1-201ENST00000438758 1403 ntBASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRAMD1AQ96CP6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 AP001269.4-201ENST00000609611 512 ntBASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRAMD1AQ96CP6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 AC092183.1-201ENST00000469884 875 ntBASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 AL139288.1-201ENST00000623748 933 ntBASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRAMD1AQ96CP6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRAMD1AQ96CP6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GRAMD1AQ96CP6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.27■□□□□ 0.35
GRAMD1AQ96CP6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.27■□□□□ 0.35
GRAMD1AQ96CP6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRAMD1AQ96CP6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.27■□□□□ 0.35
GRAMD1AQ96CP6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRAMD1AQ96CP6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRAMD1AQ96CP6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms