Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 KRT8P12-202ENST00000472924 1397 ntBASIC20.33■□□□□ 0.84
CNKSR1Q969H4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.33■□□□□ 0.84
CNKSR1Q969H4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.32■□□□□ 0.84
CNKSR1Q969H4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR1Q969H4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 AC024267.1-201ENST00000582320 895 ntBASIC20.31■□□□□ 0.84
CNKSR1Q969H4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 AC013467.2-201ENST00000605472 835 ntBASIC20.31■□□□□ 0.84
CNKSR1Q969H4 AC004461.2-201ENST00000629517 803 ntBASIC20.31■□□□□ 0.84
CNKSR1Q969H4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.31■□□□□ 0.84
CNKSR1Q969H4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 TUBB8P12-201ENST00000308911 1335 ntBASIC20.3■□□□□ 0.84
CNKSR1Q969H4 TUBB7P-202ENST00000428444 1305 ntBASIC20.3■□□□□ 0.84
CNKSR1Q969H4 TUBB8P7-204ENST00000567960 1332 ntBASIC20.3■□□□□ 0.84
CNKSR1Q969H4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 SPDYE17-201ENST00000412399 783 ntBASIC20.3■□□□□ 0.84
CNKSR1Q969H4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 ELK1P1-201ENST00000485699 580 ntBASIC20.3■□□□□ 0.84
CNKSR1Q969H4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 AC123567.1-201ENST00000548294 1261 ntBASIC20.3■□□□□ 0.84
CNKSR1Q969H4 AP005482.1-201ENST00000563722 1273 ntBASIC20.3■□□□□ 0.84
CNKSR1Q969H4 MIR4259-201ENST00000584466 101 ntBASIC20.3■□□□□ 0.84
CNKSR1Q969H4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNKSR1Q969H4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms