Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
USP6NLQ92738 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.89■□□□□ 0.61
USP6NLQ92738 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.89■□□□□ 0.61
USP6NLQ92738 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.89■□□□□ 0.61
USP6NLQ92738 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
USP6NLQ92738 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 AL021920.2-201ENST00000624828 1351 ntBASIC18.89■□□□□ 0.61
USP6NLQ92738 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.89■□□□□ 0.61
USP6NLQ92738 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.89■□□□□ 0.61
USP6NLQ92738 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.89■□□□□ 0.61
USP6NLQ92738 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP6NLQ92738 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
USP6NLQ92738 AC068880.1-201ENST00000507289 2297 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.88■□□□□ 0.61
USP6NLQ92738 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.88■□□□□ 0.61
USP6NLQ92738 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.88■□□□□ 0.61
USP6NLQ92738 AL353705.2-201ENST00000428243 662 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.88■□□□□ 0.61
USP6NLQ92738 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.88■□□□□ 0.61
USP6NLQ92738 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.88■□□□□ 0.61
USP6NLQ92738 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 AC140912.1-201ENST00000577171 1054 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.88■□□□□ 0.61
USP6NLQ92738 AL589739.1-201ENST00000607720 493 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 SPTSSB-204ENST00000617024 1292 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.88■□□□□ 0.61
USP6NLQ92738 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 AC138969.3-201ENST00000546612 1459 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 AC138932.2-201ENST00000548268 1459 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 AC126755.4-201ENST00000549796 1459 ntBASIC18.88■□□□□ 0.61
USP6NLQ92738 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
USP6NLQ92738 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
USP6NLQ92738 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.88■□□□□ 0.61
USP6NLQ92738 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.88■□□□□ 0.61
USP6NLQ92738 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6NLQ92738 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6NLQ92738 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6NLQ92738 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6NLQ92738 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6NLQ92738 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6NLQ92738 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.87■□□□□ 0.61
USP6NLQ92738 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
USP6NLQ92738 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6NLQ92738 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.87■□□□□ 0.61
USP6NLQ92738 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
USP6NLQ92738 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.87■□□□□ 0.61
USP6NLQ92738 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP6NLQ92738 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.87■□□□□ 0.61
USP6NLQ92738 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
USP6NLQ92738 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6NLQ92738 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6NLQ92738 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.86■□□□□ 0.61
USP6NLQ92738 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 AC116353.5-201ENST00000638148 1699 ntBASIC18.86■□□□□ 0.61
USP6NLQ92738 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.86■□□□□ 0.61
USP6NLQ92738 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
USP6NLQ92738 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.86■□□□□ 0.61
USP6NLQ92738 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 AC098614.1-201ENST00000368528 745 ntBASIC18.86■□□□□ 0.61
USP6NLQ92738 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
USP6NLQ92738 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
USP6NLQ92738 AL080243.2-201ENST00000418783 582 ntBASIC18.86■□□□□ 0.61
USP6NLQ92738 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
USP6NLQ92738 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.86■□□□□ 0.61
USP6NLQ92738 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.86■□□□□ 0.61
USP6NLQ92738 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 IGHV3-72-202ENST00000621503 303 ntBASIC18.86■□□□□ 0.61
USP6NLQ92738 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.86■□□□□ 0.61
USP6NLQ92738 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
USP6NLQ92738 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP6NLQ92738 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms