Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 AC073592.5-201ENST00000624854 528 ntBASIC17.28■□□□□ 0.36
SCG3Q8WXD2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 SIGLEC16-201ENST00000599858 1437 ntBASIC17.28■□□□□ 0.36
SCG3Q8WXD2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 PRYP5-201ENST00000451909 266 ntBASIC17.27■□□□□ 0.36
SCG3Q8WXD2 POLD2P1-201ENST00000511220 997 ntBASIC17.27■□□□□ 0.36
SCG3Q8WXD2 AC145285.3-201ENST00000564603 959 ntBASIC17.27■□□□□ 0.36
SCG3Q8WXD2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 AC027601.4-201ENST00000611259 610 ntBASIC17.27■□□□□ 0.36
SCG3Q8WXD2 MIR1199-201ENST00000621445 119 ntBASIC17.27■□□□□ 0.36
SCG3Q8WXD2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCG3Q8WXD2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCG3Q8WXD2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCG3Q8WXD2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SCG3Q8WXD2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.27■□□□□ 0.35
SCG3Q8WXD2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCG3Q8WXD2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SCG3Q8WXD2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCG3Q8WXD2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCG3Q8WXD2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCG3Q8WXD2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.27■□□□□ 0.35
SCG3Q8WXD2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCG3Q8WXD2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 AC098831.1-202ENST00000438821 336 ntBASIC17.26■□□□□ 0.35
SCG3Q8WXD2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 AL591424.1-201ENST00000442569 1213 ntBASIC17.26■□□□□ 0.35
SCG3Q8WXD2 BX005266.1-201ENST00000473402 457 ntBASIC17.26■□□□□ 0.35
SCG3Q8WXD2 IGHV3-22-201ENST00000520721 359 ntBASIC17.26■□□□□ 0.35
SCG3Q8WXD2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 AC006557.2-201ENST00000592985 1240 ntBASIC17.26■□□□□ 0.35
SCG3Q8WXD2 AC073592.4-201ENST00000623827 446 ntBASIC17.26■□□□□ 0.35
SCG3Q8WXD2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 PGM5P2-202ENST00000637225 1043 ntBASIC17.26■□□□□ 0.35
SCG3Q8WXD2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 AC104109.2-201ENST00000602919 1418 ntBASIC17.26■□□□□ 0.35
SCG3Q8WXD2 EGFEM1P-202ENST00000431685 1563 ntBASIC17.26■□□□□ 0.35
SCG3Q8WXD2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 AL135999.2-201ENST00000622438 1686 ntBASIC17.26■□□□□ 0.35
SCG3Q8WXD2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCG3Q8WXD2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 PCDHB17P-201ENST00000539533 2393 ntBASIC17.25■□□□□ 0.35
SCG3Q8WXD2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms