Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 PRSS29P-201ENST00000440800 595 ntBASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 ALG1L5P-201ENST00000482043 771 ntBASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 AC002347.1-201ENST00000569543 541 ntBASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHROOM3Q8TF72 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 PCGF3-213ENST00000620529 1899 ntBASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AC140658.5-201ENST00000438532 169 ntBASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 VN2R19P-201ENST00000442399 1052 ntBASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AC023141.13-201ENST00000604991 943 ntBASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AC064836.3-201ENST00000607928 673 ntBASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 RNA5SP416-201ENST00000516838 111 ntBASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 RFPL4AP1-201ENST00000530883 850 ntBASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AL513190.1-201ENST00000621254 727 ntBASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AC079781.4-201ENST00000641908 219 ntBASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHROOM3Q8TF72 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 AL031432.2-201ENST00000566714 459 ntBASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 AL928711.1-201ENST00000570165 459 ntBASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 MIR4515-201ENST00000584082 81 ntBASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHROOM3Q8TF72 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SHROOM3Q8TF72 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM3Q8TF72 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHROOM3Q8TF72 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SHROOM3Q8TF72 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.04■□□□□ 0.32
SHROOM3Q8TF72 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SHROOM3Q8TF72 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.04■□□□□ 0.32
SHROOM3Q8TF72 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.04■□□□□ 0.32
SHROOM3Q8TF72 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms