Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCER1Q8TC90 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCER1Q8TC90 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CCER1Q8TC90 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC25.12■■□□□ 1.61
CCER1Q8TC90 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCER1Q8TC90 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCER1Q8TC90 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC25.12■■□□□ 1.61
CCER1Q8TC90 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC25.12■■□□□ 1.61
CCER1Q8TC90 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 NABP1-203ENST00000409510 843 ntTSL 5 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 FAM210CP-201ENST00000445714 574 ntBASIC25.11■■□□□ 1.61
CCER1Q8TC90 HLA-J-202ENST00000469281 1241 ntBASIC25.11■■□□□ 1.61
CCER1Q8TC90 PNN-202ENST00000553331 656 ntTSL 3 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 AC138894.3-201ENST00000603787 634 ntBASIC25.11■■□□□ 1.61
CCER1Q8TC90 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 AC006277.1-201ENST00000624348 1610 ntBASIC25.11■■□□□ 1.61
CCER1Q8TC90 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC25.11■■□□□ 1.61
CCER1Q8TC90 AP005117.1-201ENST00000584346 1413 ntBASIC25.11■■□□□ 1.61
CCER1Q8TC90 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCER1Q8TC90 HYMAI-201ENST00000635591 3347 ntBASIC25.11■■□□□ 1.61
CCER1Q8TC90 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
CCER1Q8TC90 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CCER1Q8TC90 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC25.1■■□□□ 1.61
CCER1Q8TC90 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.1■■□□□ 1.61
CCER1Q8TC90 AC132008.2-207ENST00000454517 770 ntBASIC25.1■■□□□ 1.61
CCER1Q8TC90 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 FICD-205ENST00000552758 603 ntTSL 2 BASIC25.1■■□□□ 1.61
CCER1Q8TC90 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CCER1Q8TC90 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC25.1■■□□□ 1.61
CCER1Q8TC90 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC25.1■■□□□ 1.61
CCER1Q8TC90 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC25.1■■□□□ 1.61
CCER1Q8TC90 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CCER1Q8TC90 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCER1Q8TC90 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC25.09■■□□□ 1.61
CCER1Q8TC90 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCER1Q8TC90 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC25.08■■□□□ 1.61
CCER1Q8TC90 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC25.08■■□□□ 1.61
CCER1Q8TC90 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCER1Q8TC90 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCER1Q8TC90 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCER1Q8TC90 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CCER1Q8TC90 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCER1Q8TC90 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms