Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.82■□□□□ 0.12
PIK3C3Q8NEB9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PIK3C3Q8NEB9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PIK3C3Q8NEB9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 AC246785.2-201ENST00000432512 513 ntBASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 AC099063.4-201ENST00000641099 1602 ntBASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIK3C3Q8NEB9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 TUBB8P12-201ENST00000308911 1335 ntBASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 TUBB7P-202ENST00000428444 1305 ntBASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 TUBB8P7-204ENST00000567960 1332 ntBASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 AL136379.1-201ENST00000623471 2642 ntBASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 AC003669.1-201ENST00000334569 611 ntBASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 AL391256.1-201ENST00000443260 1855 ntBASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIK3C3Q8NEB9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIK3C3Q8NEB9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms