Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHTF2Q8N3S3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHTF2Q8N3S3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHTF2Q8N3S3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHTF2Q8N3S3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PHTF2Q8N3S3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHTF2Q8N3S3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.35■□□□□ 0.37
PHTF2Q8N3S3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PHTF2Q8N3S3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 HMGA1P7-201ENST00000406908 502 ntBASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 AC023141.5-201ENST00000458585 616 ntBASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 KRT8P48-201ENST00000515599 1220 ntBASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 AL139384.1-201ENST00000612143 3047 ntBASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHTF2Q8N3S3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PHTF2Q8N3S3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
PHTF2Q8N3S3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PHTF2Q8N3S3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
PHTF2Q8N3S3 OR6D1P-202ENST00000641007 5290 ntBASIC17.33■□□□□ 0.37
PHTF2Q8N3S3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHTF2Q8N3S3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.33■□□□□ 0.37
PHTF2Q8N3S3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHTF2Q8N3S3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHTF2Q8N3S3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PHTF2Q8N3S3 PCDH8P1-201ENST00000428983 2773 ntBASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 AC026120.1-201ENST00000611536 926 ntBASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 AC105020.1-201ENST00000435356 2205 ntBASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.33■□□□□ 0.36
PHTF2Q8N3S3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 AL627223.1-201ENST00000416693 442 ntBASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 AL671277.1-201ENST00000429656 993 ntBASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 TIMM8BP1-201ENST00000452384 211 ntBASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms