Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 UNC93B7-201ENST00000509439 705 ntBASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 MIR1199-201ENST00000621445 119 ntBASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 SNX33P1-201ENST00000592116 1762 ntBASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 AC131009.4-201ENST00000624048 1740 ntBASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 RNPS1P1-201ENST00000507437 918 ntBASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL3Q8IVW4 AL353732.1-201ENST00000569618 1459 ntBASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 AC079328.2-201ENST00000561241 3354 ntBASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 GGT3P-204ENST00000453783 1664 ntBASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 AC107918.2-201ENST00000530817 355 ntBASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 AC008735.5-201ENST00000623544 497 ntBASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 TP73-AS1-207ENST00000624167 988 ntBASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 ME2P1-201ENST00000426028 1970 ntBASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CDKL3Q8IVW4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 KRT8P39-201ENST00000396270 1433 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms