Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 TSPY26P-202ENST00000565928 3884 ntBASIC16.64■□□□□ 0.25
HPS6Q86YV9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 AC009154.2-201ENST00000621177 724 ntBASIC16.64■□□□□ 0.25
HPS6Q86YV9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 TP73-AS1-210ENST00000637775 1455 ntBASIC16.64■□□□□ 0.25
HPS6Q86YV9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS6Q86YV9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HPS6Q86YV9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS6Q86YV9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HPS6Q86YV9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 MIR1233-2-201ENST00000408138 82 ntBASIC16.62■□□□□ 0.25
HPS6Q86YV9 MIR1233-1-201ENST00000408722 82 ntBASIC16.62■□□□□ 0.25
HPS6Q86YV9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 KRT18P65-201ENST00000439811 1286 ntBASIC16.62■□□□□ 0.25
HPS6Q86YV9 FGFR3P6-201ENST00000457012 610 ntBASIC16.62■□□□□ 0.25
HPS6Q86YV9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms