Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE3BQ7Z3V4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBE3BQ7Z3V4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.84■□□□□ 0.93
UBE3BQ7Z3V4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 MIR770-201ENST00000390219 98 ntBASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 AC015911.4-201ENST00000588022 1070 ntBASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBE3BQ7Z3V4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBE3BQ7Z3V4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 AC005915.1-201ENST00000624912 2018 ntBASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 ALG1L8P-201ENST00000533887 760 ntBASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 AC069262.1-201ENST00000539058 672 ntBASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBE3BQ7Z3V4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 AC008677.1-201ENST00000519230 1561 ntBASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 AC142381.1-201ENST00000426099 345 ntBASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 CNN2P2-201ENST00000443536 909 ntBASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 CNN2P3-201ENST00000450201 906 ntBASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 DUX4L27-201ENST00000554796 1261 ntBASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.81■□□□□ 0.92
UBE3BQ7Z3V4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms