Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 AC105339.3-201ENST00000560043 636 ntBASIC11.2□□□□□ -0.62
SCXQ7RTU7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 Z83851.2-201ENST00000609564 659 ntBASIC11.2□□□□□ -0.62
SCXQ7RTU7 AL022326.1-202ENST00000641533 845 ntBASIC11.2□□□□□ -0.62
SCXQ7RTU7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 AC138028.4-201ENST00000564984 1845 ntBASIC11.2□□□□□ -0.62
SCXQ7RTU7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 LINC02199-201ENST00000506655 2702 ntBASIC11.2□□□□□ -0.62
SCXQ7RTU7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.2□□□□□ -0.62
SCXQ7RTU7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCXQ7RTU7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 AC122714.2-201ENST00000502787 707 ntBASIC11.19□□□□□ -0.62
SCXQ7RTU7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 RNA5SP415-201ENST00000517246 115 ntBASIC11.19□□□□□ -0.62
SCXQ7RTU7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.19□□□□□ -0.62
SCXQ7RTU7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 AC140113.2-201ENST00000604370 208 ntBASIC11.19□□□□□ -0.62
SCXQ7RTU7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 PMPCAP1-201ENST00000508114 1576 ntBASIC11.19□□□□□ -0.62
SCXQ7RTU7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 AP002414.3-201ENST00000589352 1468 ntBASIC11.19□□□□□ -0.62
SCXQ7RTU7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.19□□□□□ -0.62
SCXQ7RTU7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SCXQ7RTU7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms