Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP1BQ7LBR1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
CHMP1BQ7LBR1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP1BQ7LBR1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP1BQ7LBR1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP1BQ7LBR1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CHMP1BQ7LBR1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP1BQ7LBR1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP1BQ7LBR1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP1BQ7LBR1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP1BQ7LBR1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.58■□□□□ 0.09
CHMP1BQ7LBR1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.09
CHMP1BQ7LBR1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP1BQ7LBR1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.58■□□□□ 0.09
CHMP1BQ7LBR1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP1BQ7LBR1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP1BQ7LBR1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP1BQ7LBR1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP1BQ7LBR1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 AC098831.1-202ENST00000438821 336 ntBASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 AF228730.7-201ENST00000641842 219 ntBASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 HYMAI-201ENST00000635591 3347 ntBASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 PP12613-201ENST00000424958 2230 ntBASIC15.58■□□□□ 0.08
CHMP1BQ7LBR1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 AC006116.8-202ENST00000587620 1550 ntBASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP1BQ7LBR1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms