Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 KRT16P1-201ENST00000399124 1418 ntBASIC9.13□□□□□ -0.95
LCA10Q71F78 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LCA10Q71F78 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC9.13□□□□□ -0.95
LCA10Q71F78 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LCA10Q71F78 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LCA10Q71F78 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC9.13□□□□□ -0.95
LCA10Q71F78 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC9.13□□□□□ -0.95
LCA10Q71F78 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
LCA10Q71F78 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 Z82170.1-201ENST00000625081 3192 ntBASIC9.12□□□□□ -0.95
LCA10Q71F78 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 DGCR9-201ENST00000609630 2415 ntBASIC9.12□□□□□ -0.95
LCA10Q71F78 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LCA10Q71F78 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 CICP8-201ENST00000455800 2813 ntBASIC9.12□□□□□ -0.95
LCA10Q71F78 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC9.12□□□□□ -0.95
LCA10Q71F78 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC9.12□□□□□ -0.95
LCA10Q71F78 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 KSR1P1-201ENST00000446298 240 ntBASIC9.12□□□□□ -0.95
LCA10Q71F78 RPS2P4-201ENST00000476944 856 ntBASIC9.12□□□□□ -0.95
LCA10Q71F78 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 AC090192.1-201ENST00000517740 490 ntBASIC9.12□□□□□ -0.95
LCA10Q71F78 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC9.12□□□□□ -0.95
LCA10Q71F78 MMAB-206ENST00000540016 945 ntTSL 3 BASIC9.12□□□□□ -0.95
LCA10Q71F78 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 CKBP1-201ENST00000565489 1086 ntBASIC9.12□□□□□ -0.95
LCA10Q71F78 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
LCA10Q71F78 AC011298.2-201ENST00000617989 482 ntBASIC9.12□□□□□ -0.95
LCA10Q71F78 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC9.12□□□□□ -0.95
LCA10Q71F78 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LCA10Q71F78 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
LCA10Q71F78 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC9.12□□□□□ -0.95
LCA10Q71F78 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LCA10Q71F78 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
LCA10Q71F78 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
LCA10Q71F78 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
LCA10Q71F78 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LCA10Q71F78 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC9.11□□□□□ -0.95
LCA10Q71F78 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC9.11□□□□□ -0.95
LCA10Q71F78 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC9.11□□□□□ -0.95
LCA10Q71F78 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LCA10Q71F78 AL109659.2-201ENST00000606809 1674 ntBASIC9.11□□□□□ -0.95
LCA10Q71F78 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms