Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 AC092171.3-201ENST00000610122 2651 ntBASIC14.73□□□□□ -0.05
C11orf88Q6PI97 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.73□□□□□ -0.05
C11orf88Q6PI97 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 MIR3917-201ENST00000580971 93 ntBASIC14.73□□□□□ -0.05
C11orf88Q6PI97 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 DBET-201ENST00000630918 3363 ntBASIC14.73□□□□□ -0.05
C11orf88Q6PI97 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.72□□□□□ -0.05
C11orf88Q6PI97 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 AC010240.3-201ENST00000607688 395 ntBASIC14.72□□□□□ -0.05
C11orf88Q6PI97 AL121672.3-201ENST00000608644 468 ntBASIC14.72□□□□□ -0.05
C11orf88Q6PI97 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 REXO1L11P-201ENST00000620964 1927 ntBASIC14.72□□□□□ -0.05
C11orf88Q6PI97 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
C11orf88Q6PI97 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms