Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 AC105021.1-202ENST00000570572 669 ntBASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 AC004840.1-201ENST00000636359 365 ntBASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 CETN4P-206ENST00000642099 2168 ntBASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM71Q2Q1W2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 AL589739.1-201ENST00000607720 493 ntBASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM71Q2Q1W2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 AL080243.2-201ENST00000418783 582 ntBASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 MTND6P24-201ENST00000440466 518 ntBASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 CROCCP2-202ENST00000412962 2773 ntBASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM71Q2Q1W2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms