Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SNRPEP62304 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.85□□□□□ -0.35
SNRPEP62304 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.85□□□□□ -0.35
SNRPEP62304 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC12.85□□□□□ -0.35
SNRPEP62304 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC12.85□□□□□ -0.35
SNRPEP62304 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC12.85□□□□□ -0.35
SNRPEP62304 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.85□□□□□ -0.35
SNRPEP62304 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SNRPEP62304 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.85□□□□□ -0.35
SNRPEP62304 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.85□□□□□ -0.35
SNRPEP62304 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 KRT8P50-201ENST00000562022 1438 ntBASIC12.85□□□□□ -0.35
SNRPEP62304 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SNRPEP62304 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
SNRPEP62304 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.85□□□□□ -0.35
SNRPEP62304 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SNRPEP62304 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SNRPEP62304 AC022898.2-201ENST00000616822 1312 ntBASIC12.85□□□□□ -0.35
SNRPEP62304 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNRPEP62304 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.85□□□□□ -0.35
SNRPEP62304 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.84□□□□□ -0.35
SNRPEP62304 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SNRPEP62304 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SNRPEP62304 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.84□□□□□ -0.35
SNRPEP62304 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC12.84□□□□□ -0.35
SNRPEP62304 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SNRPEP62304 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SNRPEP62304 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SNRPEP62304 AC020658.6-201ENST00000623564 1870 ntBASIC12.84□□□□□ -0.35
SNRPEP62304 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.84□□□□□ -0.35
SNRPEP62304 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SNRPEP62304 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.84□□□□□ -0.35
SNRPEP62304 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.84□□□□□ -0.35
SNRPEP62304 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 AC019069.1-201ENST00000610008 1333 ntBASIC12.84□□□□□ -0.35
SNRPEP62304 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.84□□□□□ -0.35
SNRPEP62304 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNRPEP62304 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SNRPEP62304 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SNRPEP62304 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SNRPEP62304 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.83□□□□□ -0.35
SNRPEP62304 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
SNRPEP62304 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.83□□□□□ -0.35
SNRPEP62304 AL928921.2-201ENST00000641325 2442 ntBASIC12.83□□□□□ -0.35
SNRPEP62304 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SNRPEP62304 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.83□□□□□ -0.35
SNRPEP62304 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.83□□□□□ -0.35
SNRPEP62304 AC016027.1-202ENST00000607927 1699 ntBASIC12.83□□□□□ -0.35
SNRPEP62304 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms