Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SEC61A1P61619 AC010460.3-201ENST00000511359 1579 ntBASIC14.78□□□□□ -0.04
SEC61A1P61619 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SEC61A1P61619 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.78□□□□□ -0.04
SEC61A1P61619 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.78□□□□□ -0.04
SEC61A1P61619 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.78□□□□□ -0.04
SEC61A1P61619 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.78□□□□□ -0.04
SEC61A1P61619 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.78□□□□□ -0.04
SEC61A1P61619 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.78□□□□□ -0.04
SEC61A1P61619 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.78□□□□□ -0.04
SEC61A1P61619 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.78□□□□□ -0.04
SEC61A1P61619 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.78□□□□□ -0.04
SEC61A1P61619 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.78□□□□□ -0.04
SEC61A1P61619 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.78□□□□□ -0.04
SEC61A1P61619 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.78□□□□□ -0.04
SEC61A1P61619 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.78□□□□□ -0.04
SEC61A1P61619 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SEC61A1P61619 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SEC61A1P61619 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEC61A1P61619 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SEC61A1P61619 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SEC61A1P61619 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SEC61A1P61619 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.77□□□□□ -0.04
SEC61A1P61619 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 PAUPAR-201ENST00000630360 2965 ntBASIC14.77□□□□□ -0.04
SEC61A1P61619 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
SEC61A1P61619 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SEC61A1P61619 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEC61A1P61619 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SEC61A1P61619 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SEC61A1P61619 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.77□□□□□ -0.05
SEC61A1P61619 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
SEC61A1P61619 SLC25A6P4-201ENST00000586535 553 ntBASIC14.77□□□□□ -0.05
SEC61A1P61619 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.77□□□□□ -0.05
SEC61A1P61619 AC008608.2-201ENST00000606089 416 ntBASIC14.77□□□□□ -0.05
SEC61A1P61619 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.77□□□□□ -0.05
SEC61A1P61619 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.77□□□□□ -0.05
SEC61A1P61619 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.77□□□□□ -0.05
SEC61A1P61619 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SEC61A1P61619 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.77□□□□□ -0.05
SEC61A1P61619 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.77□□□□□ -0.05
SEC61A1P61619 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.77□□□□□ -0.05
SEC61A1P61619 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEC61A1P61619 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.76□□□□□ -0.05
SEC61A1P61619 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 AC079328.2-201ENST00000561241 3354 ntBASIC14.76□□□□□ -0.05
SEC61A1P61619 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.76□□□□□ -0.05
SEC61A1P61619 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SEC61A1P61619 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.76□□□□□ -0.05
SEC61A1P61619 AC024909.3-201ENST00000611513 2257 ntBASIC14.76□□□□□ -0.05
SEC61A1P61619 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SEC61A1P61619 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SEC61A1P61619 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.76□□□□□ -0.05
SEC61A1P61619 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.76□□□□□ -0.05
SEC61A1P61619 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.76□□□□□ -0.05
SEC61A1P61619 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms