Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CLCN3P51790 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN3P51790 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 AL391256.1-201ENST00000443260 1855 ntBASIC18.37■□□□□ 0.53
CLCN3P51790 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
CLCN3P51790 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLCN3P51790 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLCN3P51790 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 MIR346-201ENST00000362234 95 ntBASIC18.37■□□□□ 0.53
CLCN3P51790 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN3P51790 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CLCN3P51790 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN3P51790 CNN2P2-201ENST00000443536 909 ntBASIC18.37■□□□□ 0.53
CLCN3P51790 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 CNN2P3-201ENST00000450201 906 ntBASIC18.37■□□□□ 0.53
CLCN3P51790 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN3P51790 KRT18P34-201ENST00000488218 1270 ntBASIC18.37■□□□□ 0.53
CLCN3P51790 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCN3P51790 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.37■□□□□ 0.53
CLCN3P51790 AC069262.1-201ENST00000539058 672 ntBASIC18.37■□□□□ 0.53
CLCN3P51790 AL512356.2-201ENST00000546955 174 ntBASIC18.37■□□□□ 0.53
CLCN3P51790 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN3P51790 DUX4L27-201ENST00000554796 1261 ntBASIC18.37■□□□□ 0.53
CLCN3P51790 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.37■□□□□ 0.53
CLCN3P51790 AL136317.3-201ENST00000618497 906 ntBASIC18.37■□□□□ 0.53
CLCN3P51790 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLCN3P51790 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLCN3P51790 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CLCN3P51790 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.37■□□□□ 0.53
CLCN3P51790 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLCN3P51790 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN3P51790 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CLCN3P51790 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLCN3P51790 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CLCN3P51790 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.36■□□□□ 0.53
CLCN3P51790 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.36■□□□□ 0.53
CLCN3P51790 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.36■□□□□ 0.53
CLCN3P51790 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCN3P51790 AC008677.1-201ENST00000519230 1561 ntBASIC18.36■□□□□ 0.53
CLCN3P51790 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.36■□□□□ 0.53
CLCN3P51790 AC012313.1-201ENST00000593393 3059 ntBASIC18.36■□□□□ 0.53
CLCN3P51790 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN3P51790 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CLCN3P51790 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CLCN3P51790 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLCN3P51790 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 KRT8P39-201ENST00000396270 1433 ntBASIC18.35■□□□□ 0.53
CLCN3P51790 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 TUBB3P1-201ENST00000405796 1332 ntBASIC18.35■□□□□ 0.53
CLCN3P51790 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN3P51790 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCN3P51790 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCN3P51790 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN3P51790 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN3P51790 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCN3P51790 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCN3P51790 AC067863.1-201ENST00000494933 530 ntBASIC18.35■□□□□ 0.53
CLCN3P51790 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.35■□□□□ 0.53
CLCN3P51790 ALG1L8P-201ENST00000533887 760 ntBASIC18.35■□□□□ 0.53
CLCN3P51790 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCN3P51790 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CLCN3P51790 AC051619.7-201ENST00000568314 623 ntBASIC18.35■□□□□ 0.53
CLCN3P51790 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms