Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.72■□□□□ 0.75
NEDD4P46934 GGT4P-201ENST00000623672 1708 ntBASIC19.72■□□□□ 0.75
NEDD4P46934 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NEDD4P46934 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NEDD4P46934 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NEDD4P46934 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NEDD4P46934 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.71■□□□□ 0.75
NEDD4P46934 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.71■□□□□ 0.75
NEDD4P46934 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.71■□□□□ 0.75
NEDD4P46934 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NEDD4P46934 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
NEDD4P46934 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.71■□□□□ 0.75
NEDD4P46934 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.71■□□□□ 0.75
NEDD4P46934 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.71■□□□□ 0.75
NEDD4P46934 YBX1P5-201ENST00000509441 847 ntBASIC19.71■□□□□ 0.75
NEDD4P46934 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.71■□□□□ 0.75
NEDD4P46934 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
NEDD4P46934 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.71■□□□□ 0.75
NEDD4P46934 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.71■□□□□ 0.75
NEDD4P46934 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.71■□□□□ 0.75
NEDD4P46934 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
NEDD4P46934 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD4P46934 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NEDD4P46934 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.71■□□□□ 0.74
NEDD4P46934 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
NEDD4P46934 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NEDD4P46934 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.7■□□□□ 0.74
NEDD4P46934 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.7■□□□□ 0.74
NEDD4P46934 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.7■□□□□ 0.74
NEDD4P46934 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NEDD4P46934 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.7■□□□□ 0.74
NEDD4P46934 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.7■□□□□ 0.74
NEDD4P46934 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.7■□□□□ 0.74
NEDD4P46934 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.7■□□□□ 0.74
NEDD4P46934 AL355306.1-201ENST00000415580 579 ntBASIC19.7■□□□□ 0.74
NEDD4P46934 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.7■□□□□ 0.74
NEDD4P46934 HLA-J-202ENST00000469281 1241 ntBASIC19.7■□□□□ 0.74
NEDD4P46934 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NEDD4P46934 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.7■□□□□ 0.74
NEDD4P46934 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.7■□□□□ 0.74
NEDD4P46934 AC112191.1-201ENST00000523689 701 ntBASIC19.7■□□□□ 0.74
NEDD4P46934 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.7■□□□□ 0.74
NEDD4P46934 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.7■□□□□ 0.74
NEDD4P46934 MIR4469-201ENST00000583919 79 ntBASIC19.7■□□□□ 0.74
NEDD4P46934 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NEDD4P46934 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.7■□□□□ 0.74
NEDD4P46934 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD4P46934 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NEDD4P46934 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.69■□□□□ 0.74
NEDD4P46934 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.69■□□□□ 0.74
NEDD4P46934 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NEDD4P46934 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 AC016027.1-202ENST00000607927 1699 ntBASIC19.69■□□□□ 0.74
NEDD4P46934 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NEDD4P46934 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.69■□□□□ 0.74
NEDD4P46934 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.69■□□□□ 0.74
NEDD4P46934 AC002056.1-201ENST00000395613 760 ntBASIC19.69■□□□□ 0.74
NEDD4P46934 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.69■□□□□ 0.74
NEDD4P46934 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.69■□□□□ 0.74
NEDD4P46934 PMS2P4-201ENST00000412466 1052 ntBASIC19.69■□□□□ 0.74
NEDD4P46934 AC092474.2-201ENST00000424288 719 ntBASIC19.69■□□□□ 0.74
NEDD4P46934 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.69■□□□□ 0.74
NEDD4P46934 MKNK2P1-201ENST00000437526 628 ntBASIC19.69■□□□□ 0.74
NEDD4P46934 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEDD4P46934 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms