Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.93■□□□□ 0.46
SSR1P43307 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 PCDHB17P-201ENST00000539533 2393 ntBASIC17.93■□□□□ 0.46
SSR1P43307 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
SSR1P43307 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.92■□□□□ 0.46
SSR1P43307 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.92■□□□□ 0.46
SSR1P43307 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.92■□□□□ 0.46
SSR1P43307 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SSR1P43307 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 SIGLEC16-201ENST00000599858 1437 ntBASIC17.92■□□□□ 0.46
SSR1P43307 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SSR1P43307 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.92■□□□□ 0.46
SSR1P43307 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 PRELID1P1-202ENST00000567272 903 ntBASIC17.92■□□□□ 0.46
SSR1P43307 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SSR1P43307 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SSR1P43307 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SSR1P43307 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SSR1P43307 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSR1P43307 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.92■□□□□ 0.46
SSR1P43307 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SSR1P43307 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SSR1P43307 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.91■□□□□ 0.46
SSR1P43307 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
SSR1P43307 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.91■□□□□ 0.46
SSR1P43307 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SSR1P43307 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SSR1P43307 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.91■□□□□ 0.46
SSR1P43307 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 AL121772.3-201ENST00000610840 674 ntBASIC17.91■□□□□ 0.46
SSR1P43307 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.91■□□□□ 0.46
SSR1P43307 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.91■□□□□ 0.46
SSR1P43307 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSR1P43307 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SSR1P43307 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SSR1P43307 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.9■□□□□ 0.46
SSR1P43307 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SSR1P43307 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.9■□□□□ 0.46
SSR1P43307 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.9■□□□□ 0.46
SSR1P43307 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.9■□□□□ 0.46
SSR1P43307 MTDHP3-201ENST00000594186 672 ntBASIC17.9■□□□□ 0.46
SSR1P43307 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
SSR1P43307 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.9■□□□□ 0.46
SSR1P43307 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.9■□□□□ 0.46
SSR1P43307 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSR1P43307 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.9■□□□□ 0.46
SSR1P43307 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.9■□□□□ 0.46
SSR1P43307 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.9■□□□□ 0.46
SSR1P43307 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms