Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.37■□□□□ 0.53
USP8P40818 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.37■□□□□ 0.53
USP8P40818 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
USP8P40818 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
USP8P40818 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.37■□□□□ 0.53
USP8P40818 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USP8P40818 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.36■□□□□ 0.53
USP8P40818 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
USP8P40818 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
USP8P40818 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.36■□□□□ 0.53
USP8P40818 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.36■□□□□ 0.53
USP8P40818 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.36■□□□□ 0.53
USP8P40818 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.36■□□□□ 0.53
USP8P40818 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
USP8P40818 SCARNA2-201ENST00000458748 420 ntBASIC18.36■□□□□ 0.53
USP8P40818 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USP8P40818 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.36■□□□□ 0.53
USP8P40818 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.36■□□□□ 0.53
USP8P40818 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.36■□□□□ 0.53
USP8P40818 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
USP8P40818 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.36■□□□□ 0.53
USP8P40818 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.36■□□□□ 0.53
USP8P40818 MTDHP4-201ENST00000600287 670 ntBASIC18.36■□□□□ 0.53
USP8P40818 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.36■□□□□ 0.53
USP8P40818 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USP8P40818 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.36■□□□□ 0.53
USP8P40818 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
USP8P40818 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP8P40818 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.35■□□□□ 0.53
USP8P40818 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USP8P40818 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 FLJ16779-201ENST00000612722 7638 ntBASIC18.35■□□□□ 0.53
USP8P40818 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.35■□□□□ 0.53
USP8P40818 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USP8P40818 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.35■□□□□ 0.53
USP8P40818 UNC93B7-201ENST00000509439 705 ntBASIC18.35■□□□□ 0.53
USP8P40818 AF238378.1-201ENST00000526806 358 ntBASIC18.35■□□□□ 0.53
USP8P40818 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.35■□□□□ 0.53
USP8P40818 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.35■□□□□ 0.53
USP8P40818 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.35■□□□□ 0.53
USP8P40818 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP8P40818 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.35■□□□□ 0.53
USP8P40818 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP8P40818 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USP8P40818 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP8P40818 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.35■□□□□ 0.53
USP8P40818 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.34■□□□□ 0.53
USP8P40818 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.34■□□□□ 0.53
USP8P40818 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.34■□□□□ 0.53
USP8P40818 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms