Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GRIK1P39086 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GRIK1P39086 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GRIK1P39086 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GRIK1P39086 CROCCP1-201ENST00000426910 5675 ntBASIC17.67■□□□□ 0.42
GRIK1P39086 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GRIK1P39086 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.67■□□□□ 0.42
GRIK1P39086 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GRIK1P39086 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GRIK1P39086 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GRIK1P39086 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
GRIK1P39086 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GRIK1P39086 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.66■□□□□ 0.42
GRIK1P39086 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.66■□□□□ 0.42
GRIK1P39086 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
GRIK1P39086 AP001094.4-201ENST00000579008 2176 ntBASIC17.66■□□□□ 0.42
GRIK1P39086 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GRIK1P39086 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.66■□□□□ 0.42
GRIK1P39086 METTL21AP1-201ENST00000438852 635 ntBASIC17.66■□□□□ 0.42
GRIK1P39086 RN7SL589P-201ENST00000481268 310 ntBASIC17.66■□□□□ 0.42
GRIK1P39086 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 AL135744.1-201ENST00000565098 629 ntBASIC17.66■□□□□ 0.42
GRIK1P39086 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.66■□□□□ 0.42
GRIK1P39086 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.66■□□□□ 0.42
GRIK1P39086 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
GRIK1P39086 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.66■□□□□ 0.42
GRIK1P39086 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.66■□□□□ 0.42
GRIK1P39086 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.66■□□□□ 0.42
GRIK1P39086 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
GRIK1P39086 AKAP8P1-201ENST00000434743 1349 ntBASIC17.66■□□□□ 0.42
GRIK1P39086 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
GRIK1P39086 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
GRIK1P39086 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.66■□□□□ 0.42
GRIK1P39086 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GRIK1P39086 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GRIK1P39086 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.65■□□□□ 0.42
GRIK1P39086 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
GRIK1P39086 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GRIK1P39086 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GRIK1P39086 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.65■□□□□ 0.42
GRIK1P39086 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
GRIK1P39086 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.65■□□□□ 0.42
GRIK1P39086 PMS2P2-201ENST00000425039 1128 ntBASIC17.65■□□□□ 0.42
GRIK1P39086 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.65■□□□□ 0.42
GRIK1P39086 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.65■□□□□ 0.42
GRIK1P39086 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.65■□□□□ 0.42
GRIK1P39086 MIR3909-201ENST00000579518 119 ntBASIC17.65■□□□□ 0.42
GRIK1P39086 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GRIK1P39086 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.65■□□□□ 0.42
GRIK1P39086 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GRIK1P39086 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.65■□□□□ 0.42
GRIK1P39086 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GRIK1P39086 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GRIK1P39086 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
GRIK1P39086 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
GRIK1P39086 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GRIK1P39086 AC012313.1-201ENST00000593393 3059 ntBASIC17.64■□□□□ 0.41
GRIK1P39086 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.64■□□□□ 0.41
GRIK1P39086 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
GRIK1P39086 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms