Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TERF1P1-201ENST00000311003 1181 ntBASIC13.89□□□□□ -0.19
SNCAP37840 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.89□□□□□ -0.19
SNCAP37840 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 HBZP1-201ENST00000354915 429 ntBASIC13.89□□□□□ -0.19
SNCAP37840 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 GUSBP12-201ENST00000513727 720 ntBASIC13.89□□□□□ -0.19
SNCAP37840 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.89□□□□□ -0.19
SNCAP37840 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.89□□□□□ -0.19
SNCAP37840 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.89□□□□□ -0.19
SNCAP37840 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.89□□□□□ -0.19
SNCAP37840 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SNCAP37840 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SNCAP37840 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.89□□□□□ -0.19
SNCAP37840 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 AC093525.9-201ENST00000624961 1746 ntBASIC13.89□□□□□ -0.19
SNCAP37840 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.89□□□□□ -0.19
SNCAP37840 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.89□□□□□ -0.19
SNCAP37840 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
SNCAP37840 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.88□□□□□ -0.19
SNCAP37840 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SNCAP37840 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.88□□□□□ -0.19
SNCAP37840 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.88□□□□□ -0.19
SNCAP37840 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SNCAP37840 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
SNCAP37840 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.88□□□□□ -0.19
SNCAP37840 AC117947.1-201ENST00000427448 529 ntBASIC13.88□□□□□ -0.19
SNCAP37840 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 AC112907.2-201ENST00000448639 330 ntBASIC13.88□□□□□ -0.19
SNCAP37840 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.88□□□□□ -0.19
SNCAP37840 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.88□□□□□ -0.19
SNCAP37840 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.88□□□□□ -0.19
SNCAP37840 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.88□□□□□ -0.19
SNCAP37840 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.88□□□□□ -0.19
SNCAP37840 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.88□□□□□ -0.19
SNCAP37840 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
SNCAP37840 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SNCAP37840 Z83836.1-201ENST00000624605 1642 ntBASIC13.88□□□□□ -0.19
SNCAP37840 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SNCAP37840 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.88□□□□□ -0.19
SNCAP37840 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.88□□□□□ -0.19
SNCAP37840 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.88□□□□□ -0.19
SNCAP37840 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 AC092053.1-201ENST00000605787 1936 ntBASIC13.88□□□□□ -0.19
SNCAP37840 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.88□□□□□ -0.19
SNCAP37840 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SNCAP37840 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNCAP37840 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.87□□□□□ -0.19
SNCAP37840 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.87□□□□□ -0.19
SNCAP37840 AK4P3-201ENST00000418260 669 ntBASIC13.87□□□□□ -0.19
SNCAP37840 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms