Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
KRT20P35900 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
KRT20P35900 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT20P35900 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT20P35900 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT20P35900 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT20P35900 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
KRT20P35900 TPM4P1-201ENST00000436100 807 ntBASIC16.04■□□□□ 0.16
KRT20P35900 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT20P35900 BX005266.1-201ENST00000473402 457 ntBASIC16.04■□□□□ 0.16
KRT20P35900 UNC93B7-201ENST00000509439 705 ntBASIC16.04■□□□□ 0.16
KRT20P35900 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.04■□□□□ 0.16
KRT20P35900 AL022326.1-202ENST00000641533 845 ntBASIC16.04■□□□□ 0.16
KRT20P35900 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT20P35900 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.04■□□□□ 0.16
KRT20P35900 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
KRT20P35900 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT20P35900 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
KRT20P35900 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
KRT20P35900 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT20P35900 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 AC006449.5-201ENST00000610658 2098 ntBASIC16.03■□□□□ 0.16
KRT20P35900 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
KRT20P35900 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT20P35900 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT20P35900 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
KRT20P35900 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 AC073648.2-201ENST00000510116 352 ntBASIC16.03■□□□□ 0.16
KRT20P35900 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.03■□□□□ 0.16
KRT20P35900 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
KRT20P35900 RN7SL510P-201ENST00000581311 263 ntBASIC16.03■□□□□ 0.16
KRT20P35900 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 AC073592.4-201ENST00000623827 446 ntBASIC16.03■□□□□ 0.16
KRT20P35900 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT20P35900 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
KRT20P35900 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT20P35900 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT20P35900 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT20P35900 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
KRT20P35900 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT20P35900 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 RNF216P1-203ENST00000404404 2427 ntBASIC16.03■□□□□ 0.16
KRT20P35900 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT20P35900 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT20P35900 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT20P35900 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
KRT20P35900 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT20P35900 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
KRT20P35900 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT20P35900 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
KRT20P35900 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT20P35900 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 AKR1C7P-201ENST00000305623 895 ntBASIC16.02■□□□□ 0.16
KRT20P35900 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
KRT20P35900 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT20P35900 FGFR3P6-201ENST00000457012 610 ntBASIC16.02■□□□□ 0.16
KRT20P35900 EMBP1-201ENST00000458200 901 ntBASIC16.02■□□□□ 0.16
KRT20P35900 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT20P35900 AF238378.1-201ENST00000526806 358 ntBASIC16.02■□□□□ 0.16
KRT20P35900 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT20P35900 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT20P35900 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT20P35900 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms