Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 KLF4P1-201ENST00000412782 1185 ntBASIC17.75■□□□□ 0.43
CHRNA3P32297 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.75■□□□□ 0.43
CHRNA3P32297 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.75■□□□□ 0.43
CHRNA3P32297 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.75■□□□□ 0.43
CHRNA3P32297 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.75■□□□□ 0.43
CHRNA3P32297 MIR7706-201ENST00000613747 67 ntBASIC17.75■□□□□ 0.43
CHRNA3P32297 AL022326.1-202ENST00000641533 845 ntBASIC17.75■□□□□ 0.43
CHRNA3P32297 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.75■□□□□ 0.43
CHRNA3P32297 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.75■□□□□ 0.43
CHRNA3P32297 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CHRNA3P32297 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA3P32297 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA3P32297 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CHRNA3P32297 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 IL9RP2-201ENST00000423948 1312 ntBASIC17.74■□□□□ 0.43
CHRNA3P32297 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 AC004817.3-201ENST00000602957 2129 ntBASIC17.74■□□□□ 0.43
CHRNA3P32297 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.74■□□□□ 0.43
CHRNA3P32297 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.74■□□□□ 0.43
CHRNA3P32297 AL020989.1-201ENST00000422979 469 ntBASIC17.74■□□□□ 0.43
CHRNA3P32297 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.74■□□□□ 0.43
CHRNA3P32297 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.74■□□□□ 0.43
CHRNA3P32297 AC139887.3-201ENST00000568585 713 ntBASIC17.74■□□□□ 0.43
CHRNA3P32297 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CHRNA3P32297 AC008741.2-201ENST00000612792 3115 ntBASIC17.74■□□□□ 0.43
CHRNA3P32297 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 AC243591.1-201ENST00000452967 1364 ntBASIC17.74■□□□□ 0.43
CHRNA3P32297 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHRNA3P32297 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CHRNA3P32297 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.74■□□□□ 0.43
CHRNA3P32297 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA3P32297 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.74■□□□□ 0.43
CHRNA3P32297 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA3P32297 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHRNA3P32297 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA3P32297 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHRNA3P32297 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA3P32297 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA3P32297 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.73■□□□□ 0.43
CHRNA3P32297 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA3P32297 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.73■□□□□ 0.43
CHRNA3P32297 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA3P32297 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA3P32297 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.73■□□□□ 0.43
CHRNA3P32297 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.73■□□□□ 0.43
CHRNA3P32297 PRYP5-201ENST00000451909 266 ntBASIC17.73■□□□□ 0.43
CHRNA3P32297 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.73■□□□□ 0.43
CHRNA3P32297 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA3P32297 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.73■□□□□ 0.43
CHRNA3P32297 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.73■□□□□ 0.43
CHRNA3P32297 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA3P32297 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.73■□□□□ 0.43
CHRNA3P32297 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CHRNA3P32297 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
CHRNA3P32297 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.73■□□□□ 0.43
CHRNA3P32297 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CHRNA3P32297 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.73■□□□□ 0.43
CHRNA3P32297 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHRNA3P32297 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA3P32297 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHRNA3P32297 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA3P32297 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CHRNA3P32297 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CHRNA3P32297 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms