Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL512361.1-201ENST00000554200 418 ntBASIC18.11■□□□□ 0.49
HOXC8P31273 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC8P31273 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC8P31273 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HOXC8P31273 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC8P31273 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 AL023806.1-201ENST00000603994 1649 ntBASIC18.11■□□□□ 0.49
HOXC8P31273 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.11■□□□□ 0.49
HOXC8P31273 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HOXC8P31273 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HOXC8P31273 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
HOXC8P31273 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HOXC8P31273 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXC8P31273 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC8P31273 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
HOXC8P31273 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
HOXC8P31273 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.1■□□□□ 0.49
HOXC8P31273 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HOXC8P31273 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HOXC8P31273 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.1■□□□□ 0.49
HOXC8P31273 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC8P31273 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.1■□□□□ 0.49
HOXC8P31273 RN7SL692P-201ENST00000464677 288 ntBASIC18.1■□□□□ 0.49
HOXC8P31273 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 TP53TG3HP-202ENST00000569755 579 ntBASIC18.1■□□□□ 0.49
HOXC8P31273 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
HOXC8P31273 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.1■□□□□ 0.49
HOXC8P31273 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.1■□□□□ 0.49
HOXC8P31273 AC004790.1-201ENST00000612686 536 ntBASIC18.1■□□□□ 0.49
HOXC8P31273 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.1■□□□□ 0.49
HOXC8P31273 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
HOXC8P31273 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.1■□□□□ 0.49
HOXC8P31273 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HOXC8P31273 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXC8P31273 AL133373.2-201ENST00000623187 2828 ntBASIC18.1■□□□□ 0.49
HOXC8P31273 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC8P31273 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC8P31273 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
HOXC8P31273 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC8P31273 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HOXC8P31273 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.09■□□□□ 0.49
HOXC8P31273 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HOXC8P31273 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.09■□□□□ 0.49
HOXC8P31273 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.09■□□□□ 0.49
HOXC8P31273 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.09■□□□□ 0.49
HOXC8P31273 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.09■□□□□ 0.49
HOXC8P31273 AC024267.1-201ENST00000582320 895 ntBASIC18.09■□□□□ 0.49
HOXC8P31273 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.09■□□□□ 0.49
HOXC8P31273 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
HOXC8P31273 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HOXC8P31273 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HOXC8P31273 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXC8P31273 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HOXC8P31273 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HOXC8P31273 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.09■□□□□ 0.49
HOXC8P31273 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HOXC8P31273 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
HOXC8P31273 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC8P31273 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXC8P31273 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
HOXC8P31273 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC8P31273 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC8P31273 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC8P31273 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
HOXC8P31273 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HOXC8P31273 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.08■□□□□ 0.49
HOXC8P31273 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.08■□□□□ 0.49
HOXC8P31273 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
HOXC8P31273 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms