Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP1P23763 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP1P23763 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP1P23763 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP1P23763 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP1P23763 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.24□□□□□ -0.13
VAMP1P23763 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP1P23763 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP1P23763 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.24□□□□□ -0.13
VAMP1P23763 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP1P23763 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.24□□□□□ -0.13
VAMP1P23763 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VAMP1P23763 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP1P23763 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP1P23763 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.24□□□□□ -0.13
VAMP1P23763 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
VAMP1P23763 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VAMP1P23763 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VAMP1P23763 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.23□□□□□ -0.13
VAMP1P23763 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.23□□□□□ -0.13
VAMP1P23763 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VAMP1P23763 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.23□□□□□ -0.13
VAMP1P23763 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VAMP1P23763 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.23□□□□□ -0.13
VAMP1P23763 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.23□□□□□ -0.13
VAMP1P23763 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.23□□□□□ -0.13
VAMP1P23763 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VAMP1P23763 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.23□□□□□ -0.13
VAMP1P23763 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.23□□□□□ -0.13
VAMP1P23763 AP003071.4-201ENST00000562276 1284 ntBASIC14.23□□□□□ -0.13
VAMP1P23763 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.23□□□□□ -0.13
VAMP1P23763 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.23□□□□□ -0.13
VAMP1P23763 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.23□□□□□ -0.13
VAMP1P23763 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
VAMP1P23763 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 AC126177.1-201ENST00000547829 2218 ntBASIC14.23□□□□□ -0.13
VAMP1P23763 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP1P23763 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.23□□□□□ -0.13
VAMP1P23763 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.23□□□□□ -0.13
VAMP1P23763 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VAMP1P23763 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.22□□□□□ -0.13
VAMP1P23763 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.22□□□□□ -0.13
VAMP1P23763 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.22□□□□□ -0.13
VAMP1P23763 TUBB8P12-201ENST00000308911 1335 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 TUBB7P-202ENST00000428444 1305 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 TUBB8P7-204ENST00000567960 1332 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 ME2P1-201ENST00000426028 1970 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.22□□□□□ -0.13
VAMP1P23763 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.22□□□□□ -0.13
VAMP1P23763 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VAMP1P23763 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.22□□□□□ -0.13
VAMP1P23763 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VAMP1P23763 COX5BP2-201ENST00000392354 334 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.22□□□□□ -0.13
VAMP1P23763 AL390955.1-201ENST00000428694 934 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 MTCL1P1-201ENST00000446207 792 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 RBM17P1-201ENST00000453646 1190 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VAMP1P23763 AL512604.3-201ENST00000569583 964 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 AL049637.2-201ENST00000641778 930 ntBASIC14.22□□□□□ -0.13
VAMP1P23763 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
VAMP1P23763 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
VAMP1P23763 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms