Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
XRCC1P18887 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.79■□□□□ 0.28
XRCC1P18887 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.79■□□□□ 0.28
XRCC1P18887 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 AC006449.5-201ENST00000610658 2098 ntBASIC16.79■□□□□ 0.28
XRCC1P18887 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.79■□□□□ 0.28
XRCC1P18887 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
XRCC1P18887 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.79■□□□□ 0.28
XRCC1P18887 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
XRCC1P18887 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
XRCC1P18887 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 CRYGEP-201ENST00000412192 528 ntBASIC16.79■□□□□ 0.28
XRCC1P18887 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
XRCC1P18887 AC108073.2-201ENST00000464002 357 ntBASIC16.79■□□□□ 0.28
XRCC1P18887 RNA5SP416-201ENST00000516838 111 ntBASIC16.79■□□□□ 0.28
XRCC1P18887 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.79■□□□□ 0.28
XRCC1P18887 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.79■□□□□ 0.28
XRCC1P18887 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.79■□□□□ 0.28
XRCC1P18887 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.79■□□□□ 0.28
XRCC1P18887 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.79■□□□□ 0.28
XRCC1P18887 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.79■□□□□ 0.28
XRCC1P18887 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.79■□□□□ 0.28
XRCC1P18887 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
XRCC1P18887 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.79■□□□□ 0.28
XRCC1P18887 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.79■□□□□ 0.28
XRCC1P18887 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.79■□□□□ 0.28
XRCC1P18887 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.79■□□□□ 0.28
XRCC1P18887 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
XRCC1P18887 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.79■□□□□ 0.28
XRCC1P18887 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.79■□□□□ 0.28
XRCC1P18887 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
XRCC1P18887 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.79■□□□□ 0.28
XRCC1P18887 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
XRCC1P18887 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.78■□□□□ 0.28
XRCC1P18887 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
XRCC1P18887 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
XRCC1P18887 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.78■□□□□ 0.28
XRCC1P18887 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
XRCC1P18887 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.78■□□□□ 0.28
XRCC1P18887 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
XRCC1P18887 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
XRCC1P18887 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
XRCC1P18887 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
XRCC1P18887 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.78■□□□□ 0.28
XRCC1P18887 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.78■□□□□ 0.28
XRCC1P18887 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.78■□□□□ 0.28
XRCC1P18887 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.78■□□□□ 0.28
XRCC1P18887 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.78■□□□□ 0.28
XRCC1P18887 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.78■□□□□ 0.28
XRCC1P18887 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.78■□□□□ 0.28
XRCC1P18887 AC004790.2-201ENST00000623588 572 ntBASIC16.78■□□□□ 0.28
XRCC1P18887 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.78■□□□□ 0.28
XRCC1P18887 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.78■□□□□ 0.28
XRCC1P18887 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.78■□□□□ 0.28
XRCC1P18887 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.78■□□□□ 0.28
XRCC1P18887 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.78■□□□□ 0.28
XRCC1P18887 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.78■□□□□ 0.28
XRCC1P18887 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.78■□□□□ 0.28
XRCC1P18887 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
XRCC1P18887 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
XRCC1P18887 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.78■□□□□ 0.28
XRCC1P18887 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC1P18887 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC1P18887 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
XRCC1P18887 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms