Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.28■□□□□ 0.36
ERCC2P18074 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.27■□□□□ 0.36
ERCC2P18074 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC2P18074 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC2P18074 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC2P18074 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC2P18074 RHOQP3-201ENST00000437982 621 ntBASIC17.27■□□□□ 0.36
ERCC2P18074 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.27■□□□□ 0.36
ERCC2P18074 KRT18P2-201ENST00000447938 1258 ntBASIC17.27■□□□□ 0.36
ERCC2P18074 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.27■□□□□ 0.36
ERCC2P18074 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.27■□□□□ 0.36
ERCC2P18074 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.27■□□□□ 0.36
ERCC2P18074 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC2P18074 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
ERCC2P18074 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC2P18074 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC2P18074 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
ERCC2P18074 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ERCC2P18074 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ERCC2P18074 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.26■□□□□ 0.35
ERCC2P18074 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.26■□□□□ 0.35
ERCC2P18074 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ERCC2P18074 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.26■□□□□ 0.35
ERCC2P18074 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.26■□□□□ 0.35
ERCC2P18074 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.26■□□□□ 0.35
ERCC2P18074 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.26■□□□□ 0.35
ERCC2P18074 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.26■□□□□ 0.35
ERCC2P18074 AL512652.2-201ENST00000625156 1716 ntBASIC17.26■□□□□ 0.35
ERCC2P18074 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC2P18074 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ERCC2P18074 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 AC079328.2-201ENST00000561241 3354 ntBASIC17.25■□□□□ 0.35
ERCC2P18074 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.25■□□□□ 0.35
ERCC2P18074 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ERCC2P18074 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ERCC2P18074 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.25■□□□□ 0.35
ERCC2P18074 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.25■□□□□ 0.35
ERCC2P18074 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 HMGA1P7-201ENST00000406908 502 ntBASIC17.25■□□□□ 0.35
ERCC2P18074 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.25■□□□□ 0.35
ERCC2P18074 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.25■□□□□ 0.35
ERCC2P18074 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ERCC2P18074 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.25■□□□□ 0.35
ERCC2P18074 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.25■□□□□ 0.35
ERCC2P18074 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.25■□□□□ 0.35
ERCC2P18074 AC018845.2-201ENST00000568326 409 ntBASIC17.25■□□□□ 0.35
ERCC2P18074 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ERCC2P18074 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ERCC2P18074 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC2P18074 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ERCC2P18074 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.24■□□□□ 0.35
ERCC2P18074 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.24■□□□□ 0.35
ERCC2P18074 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.24■□□□□ 0.35
ERCC2P18074 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.24■□□□□ 0.35
ERCC2P18074 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.24■□□□□ 0.35
ERCC2P18074 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC2P18074 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms