Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMPD1P17405 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.53■□□□□ 0.56
SMPD1P17405 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMPD1P17405 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.52■□□□□ 0.56
SMPD1P17405 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SMPD1P17405 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.52■□□□□ 0.56
SMPD1P17405 AC068880.1-201ENST00000507289 2297 ntBASIC18.52■□□□□ 0.56
SMPD1P17405 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.52■□□□□ 0.56
SMPD1P17405 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SMPD1P17405 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.52■□□□□ 0.56
SMPD1P17405 COX5BP8-201ENST00000416911 349 ntBASIC18.52■□□□□ 0.56
SMPD1P17405 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.52■□□□□ 0.56
SMPD1P17405 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SMPD1P17405 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.52■□□□□ 0.56
SMPD1P17405 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.52■□□□□ 0.56
SMPD1P17405 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.52■□□□□ 0.56
SMPD1P17405 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.52■□□□□ 0.56
SMPD1P17405 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMPD1P17405 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMPD1P17405 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SMPD1P17405 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SMPD1P17405 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMPD1P17405 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMPD1P17405 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.52■□□□□ 0.55
SMPD1P17405 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMPD1P17405 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMPD1P17405 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.51■□□□□ 0.55
SMPD1P17405 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.51■□□□□ 0.55
SMPD1P17405 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SMPD1P17405 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SMPD1P17405 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SMPD1P17405 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.51■□□□□ 0.55
SMPD1P17405 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.51■□□□□ 0.55
SMPD1P17405 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.51■□□□□ 0.55
SMPD1P17405 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SMPD1P17405 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.51■□□□□ 0.55
SMPD1P17405 AC004840.1-201ENST00000636359 365 ntBASIC18.51■□□□□ 0.55
SMPD1P17405 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.51■□□□□ 0.55
SMPD1P17405 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.51■□□□□ 0.55
SMPD1P17405 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.51■□□□□ 0.55
SMPD1P17405 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.51■□□□□ 0.55
SMPD1P17405 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.51■□□□□ 0.55
SMPD1P17405 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMPD1P17405 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.5■□□□□ 0.55
SMPD1P17405 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMPD1P17405 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SMPD1P17405 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SMPD1P17405 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMPD1P17405 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.5■□□□□ 0.55
SMPD1P17405 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMPD1P17405 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.5■□□□□ 0.55
SMPD1P17405 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.5■□□□□ 0.55
SMPD1P17405 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMPD1P17405 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 AL080243.2-201ENST00000418783 582 ntBASIC18.5■□□□□ 0.55
SMPD1P17405 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.5■□□□□ 0.55
SMPD1P17405 MEIS3P1-201ENST00000495167 958 ntBASIC18.5■□□□□ 0.55
SMPD1P17405 AL079307.3-201ENST00000556114 283 ntBASIC18.5■□□□□ 0.55
SMPD1P17405 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.5■□□□□ 0.55
SMPD1P17405 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.5■□□□□ 0.55
SMPD1P17405 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.5■□□□□ 0.55
SMPD1P17405 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.5■□□□□ 0.55
SMPD1P17405 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.5■□□□□ 0.55
SMPD1P17405 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMPD1P17405 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms