Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.28■□□□□ 0.36
RHOP08100 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOP08100 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOP08100 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.27■□□□□ 0.36
RHOP08100 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.27■□□□□ 0.36
RHOP08100 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOP08100 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOP08100 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.27■□□□□ 0.36
RHOP08100 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOP08100 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHOP08100 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOP08100 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.27■□□□□ 0.36
RHOP08100 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
RHOP08100 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.27■□□□□ 0.36
RHOP08100 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.27■□□□□ 0.36
RHOP08100 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOP08100 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RHOP08100 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOP08100 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.27■□□□□ 0.36
RHOP08100 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOP08100 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.27■□□□□ 0.36
RHOP08100 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.27■□□□□ 0.36
RHOP08100 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.27■□□□□ 0.36
RHOP08100 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.27■□□□□ 0.36
RHOP08100 AC027307.3-201ENST00000594262 1100 ntBASIC17.27■□□□□ 0.36
RHOP08100 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOP08100 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOP08100 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RHOP08100 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.27■□□□□ 0.35
RHOP08100 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHOP08100 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHOP08100 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.27■□□□□ 0.35
RHOP08100 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RHOP08100 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHOP08100 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.27■□□□□ 0.35
RHOP08100 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHOP08100 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHOP08100 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RHOP08100 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHOP08100 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHOP08100 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RHOP08100 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.26■□□□□ 0.35
RHOP08100 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.26■□□□□ 0.35
RHOP08100 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RHOP08100 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.26■□□□□ 0.35
RHOP08100 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 MTND6P24-201ENST00000440466 518 ntBASIC17.26■□□□□ 0.35
RHOP08100 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 AC098859.1-201ENST00000502915 1238 ntBASIC17.26■□□□□ 0.35
RHOP08100 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.26■□□□□ 0.35
RHOP08100 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.26■□□□□ 0.35
RHOP08100 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.26■□□□□ 0.35
RHOP08100 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.26■□□□□ 0.35
RHOP08100 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.26■□□□□ 0.35
RHOP08100 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.26■□□□□ 0.35
RHOP08100 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RHOP08100 SPDYE22P-201ENST00000582158 798 ntBASIC17.26■□□□□ 0.35
RHOP08100 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.26■□□□□ 0.35
RHOP08100 AL662799.1-202ENST00000614205 422 ntBASIC17.26■□□□□ 0.35
RHOP08100 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHOP08100 AC018470.1-201ENST00000624790 3129 ntBASIC17.26■□□□□ 0.35
RHOP08100 AC092068.3-201ENST00000587894 2016 ntBASIC17.26■□□□□ 0.35
RHOP08100 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.26■□□□□ 0.35
RHOP08100 AC067852.2-201ENST00000590513 2313 ntBASIC17.26■□□□□ 0.35
RHOP08100 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RHOP08100 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.26■□□□□ 0.35
RHOP08100 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RHOP08100 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.25■□□□□ 0.35
RHOP08100 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RHOP08100 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.25■□□□□ 0.35
RHOP08100 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RHOP08100 KRT8P39-201ENST00000396270 1433 ntBASIC17.25■□□□□ 0.35
RHOP08100 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.25■□□□□ 0.35
RHOP08100 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.25■□□□□ 0.35
RHOP08100 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.25■□□□□ 0.35
RHOP08100 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.25■□□□□ 0.35
RHOP08100 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.25■□□□□ 0.35
RHOP08100 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.25■□□□□ 0.35
RHOP08100 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.25■□□□□ 0.35
RHOP08100 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RHOP08100 RN7SL828P-201ENST00000607615 303 ntBASIC17.25■□□□□ 0.35
RHOP08100 AL589739.1-201ENST00000607720 493 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms