Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.46■□□□□ 0.07
THBS1P07996 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.46■□□□□ 0.07
THBS1P07996 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.46■□□□□ 0.07
THBS1P07996 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 RNPS1P1-201ENST00000507437 918 ntBASIC15.46■□□□□ 0.07
THBS1P07996 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.46■□□□□ 0.07
THBS1P07996 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.46■□□□□ 0.07
THBS1P07996 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.46■□□□□ 0.07
THBS1P07996 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.46■□□□□ 0.07
THBS1P07996 MIR1199-201ENST00000621445 119 ntBASIC15.46■□□□□ 0.07
THBS1P07996 AC008735.5-201ENST00000623544 497 ntBASIC15.46■□□□□ 0.07
THBS1P07996 PGM5P2-202ENST00000637225 1043 ntBASIC15.46■□□□□ 0.07
THBS1P07996 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
THBS1P07996 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
THBS1P07996 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.46■□□□□ 0.06
THBS1P07996 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.46■□□□□ 0.06
THBS1P07996 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.46■□□□□ 0.06
THBS1P07996 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
THBS1P07996 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.46■□□□□ 0.06
THBS1P07996 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
THBS1P07996 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
THBS1P07996 MTHFR-217ENST00000641820 1569 ntBASIC15.45■□□□□ 0.06
THBS1P07996 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
THBS1P07996 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
THBS1P07996 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
THBS1P07996 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 HCG4-201ENST00000418983 998 ntBASIC15.45■□□□□ 0.06
THBS1P07996 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
THBS1P07996 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.45■□□□□ 0.06
THBS1P07996 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.45■□□□□ 0.06
THBS1P07996 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.45■□□□□ 0.06
THBS1P07996 BX640515.1-201ENST00000617215 977 ntBASIC15.45■□□□□ 0.06
THBS1P07996 AP001350.2-201ENST00000625104 1094 ntBASIC15.45■□□□□ 0.06
THBS1P07996 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.45■□□□□ 0.06
THBS1P07996 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
THBS1P07996 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 AL512652.2-201ENST00000625156 1716 ntBASIC15.45■□□□□ 0.06
THBS1P07996 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 AL139384.1-201ENST00000612143 3047 ntBASIC15.45■□□□□ 0.06
THBS1P07996 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
THBS1P07996 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.45■□□□□ 0.06
THBS1P07996 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
THBS1P07996 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
THBS1P07996 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.44■□□□□ 0.06
THBS1P07996 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
THBS1P07996 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
THBS1P07996 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.44■□□□□ 0.06
THBS1P07996 SLC22A20-204ENST00000530038 1673 ntBASIC15.44■□□□□ 0.06
THBS1P07996 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.44■□□□□ 0.06
THBS1P07996 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
THBS1P07996 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
THBS1P07996 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.44■□□□□ 0.06
THBS1P07996 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
THBS1P07996 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
THBS1P07996 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.44■□□□□ 0.06
THBS1P07996 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
THBS1P07996 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
THBS1P07996 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.44■□□□□ 0.06
THBS1P07996 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
THBS1P07996 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms