Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TPM2P07951 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TPM2P07951 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 AC005521.1-201ENST00000393351 872 ntBASIC19.18■□□□□ 0.66
TPM2P07951 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.18■□□□□ 0.66
TPM2P07951 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.18■□□□□ 0.66
TPM2P07951 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.18■□□□□ 0.66
TPM2P07951 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.18■□□□□ 0.66
TPM2P07951 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TPM2P07951 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TPM2P07951 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC19.18■□□□□ 0.66
TPM2P07951 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TPM2P07951 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.17■□□□□ 0.66
TPM2P07951 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.17■□□□□ 0.66
TPM2P07951 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TPM2P07951 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM2P07951 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 KRT18P38-201ENST00000449496 1282 ntBASIC19.17■□□□□ 0.66
TPM2P07951 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.17■□□□□ 0.66
TPM2P07951 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.17■□□□□ 0.66
TPM2P07951 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 VENTXP5-201ENST00000523979 775 ntBASIC19.17■□□□□ 0.66
TPM2P07951 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.17■□□□□ 0.66
TPM2P07951 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TPM2P07951 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TPM2P07951 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.17■□□□□ 0.66
TPM2P07951 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM2P07951 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TPM2P07951 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TPM2P07951 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TPM2P07951 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TPM2P07951 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM2P07951 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM2P07951 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.16■□□□□ 0.66
TPM2P07951 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.16■□□□□ 0.66
TPM2P07951 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.16■□□□□ 0.66
TPM2P07951 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.16■□□□□ 0.66
TPM2P07951 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.16■□□□□ 0.66
TPM2P07951 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.16■□□□□ 0.66
TPM2P07951 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.16■□□□□ 0.66
TPM2P07951 AC012306.2-201ENST00000609350 630 ntBASIC19.16■□□□□ 0.66
TPM2P07951 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TPM2P07951 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TPM2P07951 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.16■□□□□ 0.66
TPM2P07951 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 AC093525.9-201ENST00000624961 1746 ntBASIC19.16■□□□□ 0.66
TPM2P07951 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.16■□□□□ 0.66
TPM2P07951 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TPM2P07951 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM2P07951 AC073508.3-201ENST00000619697 1419 ntBASIC19.16■□□□□ 0.66
TPM2P07951 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms