Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HMGN2P05204 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.69■□□□□ 0.1
HMGN2P05204 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGN2P05204 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HMGN2P05204 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HMGN2P05204 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGN2P05204 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGN2P05204 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGN2P05204 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGN2P05204 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGN2P05204 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.69■□□□□ 0.1
HMGN2P05204 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGN2P05204 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGN2P05204 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGN2P05204 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.69■□□□□ 0.1
HMGN2P05204 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HMGN2P05204 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGN2P05204 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGN2P05204 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 AC092364.2-201ENST00000596710 2692 ntBASIC15.69■□□□□ 0.1
HMGN2P05204 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGN2P05204 AC129492.6-201ENST00000611383 1305 ntBASIC15.68■□□□□ 0.1
HMGN2P05204 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 AL671710.1-201ENST00000610245 2349 ntBASIC15.68■□□□□ 0.1
HMGN2P05204 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HMGN2P05204 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGN2P05204 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGN2P05204 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 SLC22A20-204ENST00000530038 1673 ntBASIC15.68■□□□□ 0.1
HMGN2P05204 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HMGN2P05204 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGN2P05204 PMS2P1-201ENST00000431037 1228 ntBASIC15.68■□□□□ 0.1
HMGN2P05204 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGN2P05204 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGN2P05204 AC005593.1-201ENST00000624894 515 ntBASIC15.68■□□□□ 0.1
HMGN2P05204 FAM215A-202ENST00000632077 792 ntBASIC15.68■□□□□ 0.1
HMGN2P05204 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGN2P05204 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGN2P05204 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGN2P05204 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HMGN2P05204 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGN2P05204 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGN2P05204 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGN2P05204 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HMGN2P05204 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGN2P05204 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HMGN2P05204 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGN2P05204 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGN2P05204 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGN2P05204 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGN2P05204 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
HMGN2P05204 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGN2P05204 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGN2P05204 AL353732.1-201ENST00000569618 1459 ntBASIC15.67■□□□□ 0.1
HMGN2P05204 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGN2P05204 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGN2P05204 AC018695.7-201ENST00000624587 2492 ntBASIC15.67■□□□□ 0.1
HMGN2P05204 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGN2P05204 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGN2P05204 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGN2P05204 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGN2P05204 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGN2P05204 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGN2P05204 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms