Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV3P03979 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV3P03979 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV3P03979 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV3P03979 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.24□□□□□ -0.29
TRGV3P03979 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.24□□□□□ -0.29
TRGV3P03979 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.24□□□□□ -0.29
TRGV3P03979 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.24□□□□□ -0.29
TRGV3P03979 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.24□□□□□ -0.29
TRGV3P03979 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.24□□□□□ -0.29
TRGV3P03979 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.24□□□□□ -0.29
TRGV3P03979 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.24□□□□□ -0.29
TRGV3P03979 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 AC129492.6-201ENST00000611383 1305 ntBASIC13.24□□□□□ -0.29
TRGV3P03979 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.24□□□□□ -0.29
TRGV3P03979 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.24□□□□□ -0.29
TRGV3P03979 PRSS29P-201ENST00000440800 595 ntBASIC13.24□□□□□ -0.29
TRGV3P03979 SLC25A6P2-201ENST00000497974 877 ntBASIC13.24□□□□□ -0.29
TRGV3P03979 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.24□□□□□ -0.29
TRGV3P03979 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.24□□□□□ -0.29
TRGV3P03979 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.24□□□□□ -0.29
TRGV3P03979 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
TRGV3P03979 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRGV3P03979 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.24□□□□□ -0.29
TRGV3P03979 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.24□□□□□ -0.29
TRGV3P03979 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 AL121761.2-201ENST00000598007 1648 ntBASIC13.24□□□□□ -0.29
TRGV3P03979 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.24□□□□□ -0.29
TRGV3P03979 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV3P03979 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRGV3P03979 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRGV3P03979 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV3P03979 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 KRT8P49-201ENST00000604166 1432 ntBASIC13.23□□□□□ -0.29
TRGV3P03979 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRGV3P03979 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRGV3P03979 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
TRGV3P03979 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRGV3P03979 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
TRGV3P03979 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV3P03979 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
TRGV3P03979 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.23□□□□□ -0.29
TRGV3P03979 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 AP002490.2-201ENST00000524791 560 ntBASIC13.23□□□□□ -0.29
TRGV3P03979 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.23□□□□□ -0.29
TRGV3P03979 AC145285.3-201ENST00000564603 959 ntBASIC13.23□□□□□ -0.29
TRGV3P03979 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.23□□□□□ -0.29
TRGV3P03979 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV3P03979 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
TRGV3P03979 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRGV3P03979 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV3P03979 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRGV3P03979 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms