Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 ATP5G2P1-201ENST00000433580 426 ntBASIC15.15■□□□□ 0.02
HLA-DQA2P01906 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 AL161772.1-201ENST00000610494 4412 ntBASIC15.14■□□□□ 0.01
HLA-DQA2P01906 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 LINC00982-205ENST00000420957 435 ntBASIC15.14■□□□□ 0.01
HLA-DQA2P01906 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 AC079776.2-201ENST00000641154 1609 ntBASIC15.14■□□□□ 0.01
HLA-DQA2P01906 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQA2P01906 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 AC004817.3-201ENST00000602957 2129 ntBASIC15.13■□□□□ 0.01
HLA-DQA2P01906 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 KRT16P4-201ENST00000453883 522 ntBASIC15.13■□□□□ 0.01
HLA-DQA2P01906 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DQA2P01906 SIGLEC16-201ENST00000599858 1437 ntBASIC15.13■□□□□ 0.01
HLA-DQA2P01906 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms