Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 POLD2P1-201ENST00000511220 997 ntBASIC18.04■□□□□ 0.48
HLA-DRAP01903 KRT18P58-201ENST00000527480 1120 ntBASIC18.04■□□□□ 0.48
HLA-DRAP01903 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 AL513190.1-201ENST00000621254 727 ntBASIC18.04■□□□□ 0.48
HLA-DRAP01903 AC092865.6-201ENST00000642101 219 ntBASIC18.04■□□□□ 0.48
HLA-DRAP01903 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.04■□□□□ 0.48
HLA-DRAP01903 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DRAP01903 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRAP01903 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.03■□□□□ 0.48
HLA-DRAP01903 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HLA-DRAP01903 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRAP01903 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRAP01903 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRAP01903 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRAP01903 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRAP01903 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRAP01903 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 RNU1-129P-201ENST00000384064 167 ntBASIC18.02■□□□□ 0.48
HLA-DRAP01903 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRAP01903 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRAP01903 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRAP01903 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRAP01903 U1.21-201ENST00000580816 167 ntBASIC18.02■□□□□ 0.48
HLA-DRAP01903 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
HLA-DRAP01903 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DRAP01903 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DRAP01903 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.02■□□□□ 0.47
HLA-DRAP01903 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HLA-DRAP01903 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DRAP01903 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DRAP01903 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRAP01903 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DRAP01903 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRAP01903 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRAP01903 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRAP01903 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRAP01903 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms