Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CD4P01730 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD4P01730 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CD4P01730 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.45■□□□□ 0.54
CD4P01730 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.45■□□□□ 0.54
CD4P01730 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD4P01730 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD4P01730 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CD4P01730 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD4P01730 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CD4P01730 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD4P01730 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD4P01730 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD4P01730 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD4P01730 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CD4P01730 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CD4P01730 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.44■□□□□ 0.54
CD4P01730 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 FOXO1B-201ENST00000504678 1527 ntBASIC18.44■□□□□ 0.54
CD4P01730 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CD4P01730 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.44■□□□□ 0.54
CD4P01730 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.44■□□□□ 0.54
CD4P01730 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.44■□□□□ 0.54
CD4P01730 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 AC009407.1-201ENST00000568958 598 ntBASIC18.44■□□□□ 0.54
CD4P01730 TP53TG3HP-202ENST00000569755 579 ntBASIC18.44■□□□□ 0.54
CD4P01730 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.44■□□□□ 0.54
CD4P01730 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.44■□□□□ 0.54
CD4P01730 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 LINC00895-201ENST00000629028 1637 ntBASIC18.44■□□□□ 0.54
CD4P01730 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.44■□□□□ 0.54
CD4P01730 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.44■□□□□ 0.54
CD4P01730 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.44■□□□□ 0.54
CD4P01730 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CD4P01730 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.44■□□□□ 0.54
CD4P01730 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD4P01730 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.43■□□□□ 0.54
CD4P01730 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CD4P01730 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.43■□□□□ 0.54
CD4P01730 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CD4P01730 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.43■□□□□ 0.54
CD4P01730 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.43■□□□□ 0.54
CD4P01730 U91328.1-201ENST00000437528 223 ntBASIC18.43■□□□□ 0.54
CD4P01730 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.43■□□□□ 0.54
CD4P01730 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.43■□□□□ 0.54
CD4P01730 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.43■□□□□ 0.54
CD4P01730 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.43■□□□□ 0.54
CD4P01730 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CD4P01730 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CD4P01730 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD4P01730 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD4P01730 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD4P01730 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD4P01730 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD4P01730 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CD4P01730 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.42■□□□□ 0.54
CD4P01730 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.42■□□□□ 0.54
CD4P01730 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD4P01730 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD4P01730 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD4P01730 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.42■□□□□ 0.54
CD4P01730 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.42■□□□□ 0.54
CD4P01730 SLC25A1P3-201ENST00000395415 828 ntBASIC18.42■□□□□ 0.54
CD4P01730 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD4P01730 ARSEP1-201ENST00000420443 635 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms