Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 MIR4492-201ENST00000581627 80 ntBASIC17.58■□□□□ 0.4
TRUB2O95900 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TRUB2O95900 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.58■□□□□ 0.4
TRUB2O95900 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.58■□□□□ 0.4
TRUB2O95900 AC023141.13-201ENST00000604991 943 ntBASIC17.58■□□□□ 0.4
TRUB2O95900 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRUB2O95900 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.58■□□□□ 0.4
TRUB2O95900 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRUB2O95900 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRUB2O95900 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRUB2O95900 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
TRUB2O95900 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRUB2O95900 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.58■□□□□ 0.4
TRUB2O95900 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRUB2O95900 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRUB2O95900 PCDHB19P-201ENST00000570871 2371 ntBASIC17.58■□□□□ 0.4
TRUB2O95900 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRUB2O95900 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRUB2O95900 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRUB2O95900 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.57■□□□□ 0.4
TRUB2O95900 AC006538.1-201ENST00000567905 1585 ntBASIC17.57■□□□□ 0.4
TRUB2O95900 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRUB2O95900 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.57■□□□□ 0.4
TRUB2O95900 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRUB2O95900 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TRUB2O95900 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 AC023274.1-201ENST00000418278 595 ntBASIC17.57■□□□□ 0.4
TRUB2O95900 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.57■□□□□ 0.4
TRUB2O95900 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRUB2O95900 AC040169.1-201ENST00000565382 521 ntBASIC17.57■□□□□ 0.4
TRUB2O95900 AL139011.1-202ENST00000642063 584 ntBASIC17.57■□□□□ 0.4
TRUB2O95900 AC092865.6-201ENST00000642101 219 ntBASIC17.57■□□□□ 0.4
TRUB2O95900 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.57■□□□□ 0.4
TRUB2O95900 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRUB2O95900 AC131009.4-201ENST00000624048 1740 ntBASIC17.57■□□□□ 0.4
TRUB2O95900 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.57■□□□□ 0.4
TRUB2O95900 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRUB2O95900 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRUB2O95900 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRUB2O95900 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRUB2O95900 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRUB2O95900 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.56■□□□□ 0.4
TRUB2O95900 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 AC025580.3-201ENST00000617932 1424 ntBASIC17.56■□□□□ 0.4
TRUB2O95900 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.56■□□□□ 0.4
TRUB2O95900 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.56■□□□□ 0.4
TRUB2O95900 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.56■□□□□ 0.4
TRUB2O95900 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRUB2O95900 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.56■□□□□ 0.4
TRUB2O95900 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.56■□□□□ 0.4
TRUB2O95900 HLA-J-202ENST00000469281 1241 ntBASIC17.56■□□□□ 0.4
TRUB2O95900 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.56■□□□□ 0.4
TRUB2O95900 KRT19P2-202ENST00000557173 1012 ntBASIC17.56■□□□□ 0.4
TRUB2O95900 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRUB2O95900 MIR4515-201ENST00000584082 81 ntBASIC17.56■□□□□ 0.4
TRUB2O95900 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 AL513190.1-201ENST00000621254 727 ntBASIC17.56■□□□□ 0.4
TRUB2O95900 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TRUB2O95900 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRUB2O95900 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.56■□□□□ 0.4
TRUB2O95900 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRUB2O95900 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.56■□□□□ 0.4
TRUB2O95900 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRUB2O95900 SNX33P1-201ENST00000592116 1762 ntBASIC17.56■□□□□ 0.4
TRUB2O95900 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRUB2O95900 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRUB2O95900 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRUB2O95900 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TRUB2O95900 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TRUB2O95900 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRUB2O95900 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.55■□□□□ 0.4
TRUB2O95900 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.55■□□□□ 0.4
TRUB2O95900 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms