Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ACTL9-202ENST00000612068 1252 ntBASIC14.95□□□□□ -0.02
CNOT4O95628 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CNOT4O95628 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CNOT4O95628 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CNOT4O95628 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.95□□□□□ -0.02
CNOT4O95628 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.95□□□□□ -0.02
CNOT4O95628 AL353732.1-201ENST00000569618 1459 ntBASIC14.95□□□□□ -0.02
CNOT4O95628 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.94□□□□□ -0.02
CNOT4O95628 KRT18P28-201ENST00000453838 1332 ntBASIC14.94□□□□□ -0.02
CNOT4O95628 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
CNOT4O95628 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.94□□□□□ -0.02
CNOT4O95628 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.94□□□□□ -0.02
CNOT4O95628 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CNOT4O95628 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CNOT4O95628 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 HCG4-201ENST00000418983 998 ntBASIC14.94□□□□□ -0.02
CNOT4O95628 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.94□□□□□ -0.02
CNOT4O95628 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CNOT4O95628 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.94□□□□□ -0.02
CNOT4O95628 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.94□□□□□ -0.02
CNOT4O95628 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.94□□□□□ -0.02
CNOT4O95628 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.94□□□□□ -0.02
CNOT4O95628 AL596442.2-201ENST00000610240 980 ntBASIC14.94□□□□□ -0.02
CNOT4O95628 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.94□□□□□ -0.02
CNOT4O95628 AC004877.2-201ENST00000623941 599 ntBASIC14.94□□□□□ -0.02
CNOT4O95628 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.94□□□□□ -0.02
CNOT4O95628 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CNOT4O95628 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT4O95628 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
CNOT4O95628 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.93□□□□□ -0.02
CNOT4O95628 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.93□□□□□ -0.02
CNOT4O95628 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CNOT4O95628 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CNOT4O95628 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.93□□□□□ -0.02
CNOT4O95628 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.93□□□□□ -0.02
CNOT4O95628 AP006288.1-201ENST00000446065 395 ntBASIC14.93□□□□□ -0.02
CNOT4O95628 AL513480.1-201ENST00000451731 511 ntBASIC14.93□□□□□ -0.02
CNOT4O95628 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.93□□□□□ -0.02
CNOT4O95628 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.93□□□□□ -0.02
CNOT4O95628 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.93□□□□□ -0.02
CNOT4O95628 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.93□□□□□ -0.02
CNOT4O95628 KRT19P2-202ENST00000557173 1012 ntBASIC14.93□□□□□ -0.02
CNOT4O95628 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.93□□□□□ -0.02
CNOT4O95628 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CNOT4O95628 SNHG9-202ENST00000564014 471 ntBASIC14.93□□□□□ -0.02
CNOT4O95628 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.93□□□□□ -0.02
CNOT4O95628 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.93□□□□□ -0.02
CNOT4O95628 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.93□□□□□ -0.02
CNOT4O95628 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.93□□□□□ -0.02
CNOT4O95628 TNRC18P3-201ENST00000441896 2691 ntBASIC14.93□□□□□ -0.02
CNOT4O95628 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CNOT4O95628 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CNOT4O95628 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CNOT4O95628 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CNOT4O95628 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT4O95628 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.93□□□□□ -0.02
CNOT4O95628 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CNOT4O95628 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT4O95628 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.92□□□□□ -0.02
CNOT4O95628 BCAR1-209ENST00000546196 1340 ntBASIC14.92□□□□□ -0.02
CNOT4O95628 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms