Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SMARCA5O60264 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SMARCA5O60264 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCA5O60264 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.7■□□□□ 0.91
SMARCA5O60264 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SMARCA5O60264 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SMARCA5O60264 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
SMARCA5O60264 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 HMGA1P7-201ENST00000406908 502 ntBASIC20.7■□□□□ 0.9
SMARCA5O60264 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.7■□□□□ 0.9
SMARCA5O60264 AL513480.1-201ENST00000451731 511 ntBASIC20.7■□□□□ 0.9
SMARCA5O60264 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.7■□□□□ 0.9
SMARCA5O60264 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
SMARCA5O60264 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCA5O60264 AC005412.3-201ENST00000580309 715 ntBASIC20.7■□□□□ 0.9
SMARCA5O60264 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
SMARCA5O60264 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.7■□□□□ 0.9
SMARCA5O60264 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCA5O60264 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCA5O60264 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SMARCA5O60264 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCA5O60264 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SMARCA5O60264 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCA5O60264 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SMARCA5O60264 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SMARCA5O60264 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.69■□□□□ 0.9
SMARCA5O60264 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SMARCA5O60264 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCA5O60264 AP000347.1-202ENST00000435868 847 ntBASIC20.69■□□□□ 0.9
SMARCA5O60264 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.69■□□□□ 0.9
SMARCA5O60264 AC106730.1-201ENST00000566722 1090 ntBASIC20.69■□□□□ 0.9
SMARCA5O60264 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCA5O60264 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCA5O60264 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.69■□□□□ 0.9
SMARCA5O60264 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCA5O60264 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCA5O60264 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCA5O60264 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCA5O60264 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCA5O60264 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCA5O60264 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SMARCA5O60264 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SMARCA5O60264 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SMARCA5O60264 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMARCA5O60264 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCA5O60264 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMARCA5O60264 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCA5O60264 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCA5O60264 AC087641.1-201ENST00000557561 1021 ntBASIC20.68■□□□□ 0.9
SMARCA5O60264 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCA5O60264 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.68■□□□□ 0.9
SMARCA5O60264 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCA5O60264 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCA5O60264 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCA5O60264 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SMARCA5O60264 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 KRT8P39-201ENST00000396270 1433 ntBASIC20.68■□□□□ 0.9
SMARCA5O60264 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms