Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.35□□□□□ -0.11
SDCBPO00560 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 MIR1224-201ENST00000408193 85 ntBASIC14.35□□□□□ -0.11
SDCBPO00560 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.35□□□□□ -0.11
SDCBPO00560 KLF4P1-201ENST00000412782 1185 ntBASIC14.35□□□□□ -0.11
SDCBPO00560 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.35□□□□□ -0.11
SDCBPO00560 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SDCBPO00560 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.35□□□□□ -0.11
SDCBPO00560 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.35□□□□□ -0.11
SDCBPO00560 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 STK25P1-201ENST00000585406 838 ntBASIC14.35□□□□□ -0.11
SDCBPO00560 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.35□□□□□ -0.11
SDCBPO00560 AC010331.1-201ENST00000611423 582 ntBASIC14.35□□□□□ -0.11
SDCBPO00560 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.35□□□□□ -0.11
SDCBPO00560 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SDCBPO00560 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SDCBPO00560 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SDCBPO00560 GPR89P-201ENST00000407924 1495 ntBASIC14.35□□□□□ -0.11
SDCBPO00560 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 AL353593.2-201ENST00000602529 1483 ntBASIC14.35□□□□□ -0.11
SDCBPO00560 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.35□□□□□ -0.11
SDCBPO00560 AC022188.1-201ENST00000620960 1664 ntBASIC14.35□□□□□ -0.11
SDCBPO00560 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.35□□□□□ -0.11
SDCBPO00560 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SDCBPO00560 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.35□□□□□ -0.11
SDCBPO00560 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SDCBPO00560 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.35□□□□□ -0.11
SDCBPO00560 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.35□□□□□ -0.11
SDCBPO00560 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDCBPO00560 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.34□□□□□ -0.11
SDCBPO00560 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SDCBPO00560 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.34□□□□□ -0.11
SDCBPO00560 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SDCBPO00560 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.34□□□□□ -0.11
SDCBPO00560 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 AC003669.1-201ENST00000334569 611 ntBASIC14.34□□□□□ -0.11
SDCBPO00560 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SDCBPO00560 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.34□□□□□ -0.11
SDCBPO00560 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.34□□□□□ -0.11
SDCBPO00560 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.34□□□□□ -0.11
SDCBPO00560 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.34□□□□□ -0.11
SDCBPO00560 AC093458.2-201ENST00000623150 629 ntBASIC14.34□□□□□ -0.11
SDCBPO00560 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SDCBPO00560 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.34□□□□□ -0.11
SDCBPO00560 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SDCBPO00560 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.34□□□□□ -0.11
SDCBPO00560 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SDCBPO00560 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SDCBPO00560 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.33□□□□□ -0.11
SDCBPO00560 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.11
SDCBPO00560 AC068418.2-201ENST00000577309 3703 ntBASIC14.33□□□□□ -0.11
SDCBPO00560 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SDCBPO00560 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SDCBPO00560 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SDCBPO00560 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SDCBPO00560 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SDCBPO00560 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SDCBPO00560 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDCBPO00560 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms