Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 INGX-201ENST00000359239 846 ntBASIC11.85□□□□□ -0.51
LINC01546A6NGU7 AC012618.2-201ENST00000428058 849 ntBASIC11.85□□□□□ -0.51
LINC01546A6NGU7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 FAM197Y4-202ENST00000622692 608 ntBASIC11.85□□□□□ -0.51
LINC01546A6NGU7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.85□□□□□ -0.51
LINC01546A6NGU7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 PCGF3-213ENST00000620529 1899 ntBASIC11.85□□□□□ -0.51
LINC01546A6NGU7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 KLF4P1-201ENST00000412782 1185 ntBASIC11.84□□□□□ -0.51
LINC01546A6NGU7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 GCSHP2-201ENST00000560971 527 ntBASIC11.84□□□□□ -0.51
LINC01546A6NGU7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 AC233702.5-201ENST00000584107 538 ntBASIC11.84□□□□□ -0.51
LINC01546A6NGU7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 AL049637.2-201ENST00000641778 930 ntBASIC11.84□□□□□ -0.51
LINC01546A6NGU7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01546A6NGU7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms