Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 MIR4745-201ENST00000577608 62 ntBASIC14.66□□□□□ -0.06
MBD3L3A6NE82 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 AC007967.4-201ENST00000614700 386 ntBASIC14.66□□□□□ -0.06
MBD3L3A6NE82 SPTSSB-204ENST00000617024 1292 ntBASIC14.66□□□□□ -0.06
MBD3L3A6NE82 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AC098859.1-201ENST00000502915 1238 ntBASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AC097493.3-201ENST00000509725 367 ntBASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AL390754.1-201ENST00000619088 582 ntBASIC14.65□□□□□ -0.06
MBD3L3A6NE82 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AL645728.1-201ENST00000366221 2101 ntBASIC14.65□□□□□ -0.06
MBD3L3A6NE82 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.65□□□□□ -0.06
MBD3L3A6NE82 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L3A6NE82 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.07
MBD3L3A6NE82 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.65□□□□□ -0.07
MBD3L3A6NE82 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 AC092580.3-201ENST00000430932 139 ntBASIC14.64□□□□□ -0.07
MBD3L3A6NE82 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 AC003101.2-201ENST00000612557 442 ntBASIC14.64□□□□□ -0.07
MBD3L3A6NE82 AC020765.3-201ENST00000613051 740 ntBASIC14.64□□□□□ -0.07
MBD3L3A6NE82 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms