Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 AC069120.2-201ENST00000524091 540 ntBASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TBC1D3BA6NDS4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 AC067852.2-201ENST00000590513 2313 ntBASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 CROCCP1-201ENST00000426910 5675 ntBASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 AL512638.1-201ENST00000457493 794 ntBASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 AC124947.2-201ENST00000547118 1133 ntBASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 MIR4453-201ENST00000584019 89 ntBASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 AL390754.1-201ENST00000619088 582 ntBASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 AC092053.1-201ENST00000605787 1936 ntBASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3BA6NDS4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms