Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PALM3A6NDB9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PALM3A6NDB9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PALM3A6NDB9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.33■□□□□ 0.69
PALM3A6NDB9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PALM3A6NDB9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PALM3A6NDB9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PALM3A6NDB9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
PALM3A6NDB9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PALM3A6NDB9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PALM3A6NDB9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
PALM3A6NDB9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PALM3A6NDB9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PALM3A6NDB9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PALM3A6NDB9 AC004461.1-201ENST00000412461 403 ntBASIC19.33■□□□□ 0.68
PALM3A6NDB9 RPS8P6-201ENST00000426177 609 ntBASIC19.33■□□□□ 0.68
PALM3A6NDB9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PALM3A6NDB9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.33■□□□□ 0.68
PALM3A6NDB9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.33■□□□□ 0.68
PALM3A6NDB9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.33■□□□□ 0.68
PALM3A6NDB9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.33■□□□□ 0.68
PALM3A6NDB9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.33■□□□□ 0.68
PALM3A6NDB9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.33■□□□□ 0.68
PALM3A6NDB9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.33■□□□□ 0.68
PALM3A6NDB9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
PALM3A6NDB9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PALM3A6NDB9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PALM3A6NDB9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PALM3A6NDB9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PALM3A6NDB9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.33■□□□□ 0.68
PALM3A6NDB9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 AGGF1P2-201ENST00000426656 2106 ntBASIC19.32■□□□□ 0.68
PALM3A6NDB9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 AD000864.1-201ENST00000624076 2295 ntBASIC19.32■□□□□ 0.68
PALM3A6NDB9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.32■□□□□ 0.68
PALM3A6NDB9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PALM3A6NDB9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 AL031731.1-201ENST00000642131 2094 ntBASIC19.31■□□□□ 0.68
PALM3A6NDB9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 AC079140.1-201ENST00000508039 487 ntBASIC19.31■□□□□ 0.68
PALM3A6NDB9 AP000344.2-201ENST00000512987 629 ntBASIC19.31■□□□□ 0.68
PALM3A6NDB9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 LINC01225-203ENST00000563550 1244 ntBASIC19.31■□□□□ 0.68
PALM3A6NDB9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PALM3A6NDB9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.31■□□□□ 0.68
PALM3A6NDB9 HLA-A-202ENST00000376806 1854 ntBASIC19.31■□□□□ 0.68
PALM3A6NDB9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms