Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 AC134043.2-201ENST00000624206 2238 ntBASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 RHOQP3-201ENST00000437982 621 ntBASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 AC112482.1-201ENST00000492080 688 ntBASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 AC010507.1-201ENST00000633895 436 ntBASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 AC092865.6-201ENST00000642101 219 ntBASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LRCOL1A6NCL2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 AC087163.2-201ENST00000457299 853 ntBASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 SLC25A6P2-201ENST00000497974 877 ntBASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 AL513190.1-201ENST00000621254 727 ntBASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 AC055717.3-201ENST00000622967 595 ntBASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 AC004877.2-201ENST00000623941 599 ntBASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 CICP6-201ENST00000457191 2729 ntBASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.29□□□□□ -0.6
LRCOL1A6NCL2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRCOL1A6NCL2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRCOL1A6NCL2 PRORSD1P-202ENST00000563365 2154 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms