Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 AC243591.1-201ENST00000452967 1364 ntBASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 AC073648.2-201ENST00000510116 352 ntBASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV1A0A0A0MS02 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 AL590787.1-201ENST00000568856 1315 ntBASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 AKR1C7P-201ENST00000305623 895 ntBASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 AF238378.1-201ENST00000526806 358 ntBASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 AL365209.1-201ENST00000624418 6473 ntBASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV1A0A0A0MS02 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
TRGV1A0A0A0MS02 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms