Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 AC098859.1-201ENST00000502915 1238 ntBASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF1Q9Y6D6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 AC092506.1-202ENST00000401022 528 ntBASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 FAM21FP-201ENST00000426241 1131 ntBASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 RHOQP1-201ENST00000555758 579 ntBASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 AC243960.2-201ENST00000600996 747 ntBASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF1Q9Y6D6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 AC024267.1-201ENST00000582320 895 ntBASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF1Q9Y6D6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 KRT43P-201ENST00000434019 910 ntBASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 MIR5189-201ENST00000577370 114 ntBASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 MPDU1-223ENST00000582151 728 ntBASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF1Q9Y6D6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms